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Originally Posted by amaterasu4
I've no idea what was the Patriots' idea when kidnapping Raiden and turning him into a cyborg but the Metal Gear database says he was left to die by the Patriots and Big Mama/Eva saved him.
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I believe Patriots just tortured him by severing his body. I also don't know why they grafted cyborg body into him, though.... probably as an experiment for them / or act as a short-term "life support" for him (since all was left of him was the head and spine, minus his jaw) so they can continue to torture him.
Later, it was Dr. Madnar who made him into a proper cyborg. I believe it's to save his life too + Raiden's willingness to continue fighting (otherwise, he could just use a human cyborg body like his MGS4 ending)