I'm quite sure with all those tails rammaging around swiftly, the least of Kyubi's problems are moving around.
Also, I'm quite sure he isn't stupid on the account that he can talk, and think for himself while imporisoned. Therefore, I'm quite sure he'd smell something fishy, like MOVING once he senses his chakra is being taken away.
But aside all that.
If Yondaime DID seal Kyubi with that seal, don't you think Kyubi would be floating around with Yondaime in Death God's stomach forever and ever, and there wouldn't be a need for Naruto?
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