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what would happen to the bodies of everyone? if they place everyone in the matrix, wont the ninja brain only last as long as the body is alive?
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I assume that once the plan takes effect, the flow of time will essentially cease. Itachi's genjutsu was strong enough to make a second last for days, so the moon's eye could make it last forever (think limbo - inception). Of course, who knows what happens when everyone dies inside the genjutsu and their offspring are left as byproducts of mingled minds?