Regards the vic in Ep 1, note that initially she was supposed to be taken down with the non-lethal Paralyzer mode. Note that in real life, SWAT and police officers
would restrain the hostage once the perp is taken down - this is the same principle here, merely on a more violent scale.
Secondly, she's upgraded to lethal status when she's sitting in that pool of what I assume is either petrol or kerosene, holding a lit lighter. She was quite willing to drop that lighter and blow everyone to kingdom come, and would have done that had Akane not talked her down.
Third, as the close of ep 3 indicates, she's undergoing counseling and is on the way to making a full recovery. So while I have serious concerns with the Sibyl system (seriously,
nobody capable of making judgement calls or handling stress because it's all outsourced to some cyberpunk computer-AI-system? I can see where Masaoka is coming from there), it's not as if this is Saudi Arabia or the Middle East, where rape victims are instead jailed and punished for the crime of premarital sex.
Though obviously when you surrender everything to the system... then you're going to get problems if the system is tampered with or sabotaged. This is cyberpunk: It's a genre convention that if something is supposedly tamper-proof, someone will either figure out a way to hack it or sabotage it, or it'll go rampant and sabotage itself.
Also, that factory had the best cyber security ever that I've seen
