All I can say is anime Kyou > all other version Kyou. Then again, I love Kagami, so....
Anyways, here are my votes...
Shana vs
Hinagiku - Voted this way before, not going to change my mind now.
Suigintou vs
Yuki - Alien > non-human
Nanoha vs
Tama-nee - Shizuka Itou > Yukari Tamura
Kyou vs Tsukasa - Kyou just pwns in my moe meter when compared to Tsukasa
Mikuru vs Nagi - I dunno, but Kugimiya tsundere loli never really jived with me
Louise vs
Tohsaka - Ditto as above, but especially so since it's the Zettai Ryouiki master
Horo vs
Tomoyo - Non-human bias showing
Nayuki vs Konata - no contest at all, as Nayuki is among my top picks
Abstain - Yuri vs non-human... *groan*
Abstain - Negima girl vs Yuri... *groan*
Maria vs Aruruu - No contest again, as Maria ranks highly for me
Evangeline vs
Kotomi - absolute moe property for me
Rika vs
Sakura - anti-loli vote, but then again Rika has lived longer than all the contestants save maybe one or two
Nagisa vs Hanyuu - see above
Alice vs
Mion - aww c'mon, Mion was so cute trying to be girlish
Fuko vs Saber - as before, Saber = GAR != moe
Touka vs
Kagami - Kagami is 3/4 the reason why I still drudged through L*S
Sakura vs
Ayu - gogogo absolute moe property of mine!
Yuno vs
Haruhi - me = Haruhi-tard
Shinku vs [b]Matsuri[b/] - supernatural > doll
Eri vs Ayumu - Eri-fanboyism here.
Setsuna vs
Mai - absolute moe property again!
Tamao vs
Konomi - see above
Eruruu vs Shiori - does Shiori have anything like the tail grab? Didn't think so
Vita vs
Tessa - anti-Yuri vote again, but then again Tessa ranks mid-high for me anyways
Yue vs
Tsuruya - Negima girls to me don't stand a chance against lolfang-tan
Nodoka vs
Kamichu - God > Negima
Suiseiseki vs
Sakura-hime - aboslutely wiped the floor in every respect in my moe scales
Tamaki vs Ryou - absolute moe property yet again
Rena vs Imouto - add another victim to the list...
Sayuri vs Chiaki - only wins because of mahou shoujo
CC vs Kiri - Kiri = Kiripi
EDIT:
Agree with Kholdstare, as the only reason why I'm holding out on votes for the pictures is because I don't know if there's a better newer one that's gonna come up in the future. Maybe set a deadline for the pics, or something?